SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G050900

Alias COL16

Description Not annotated

Gene interval Chr16:4874634–4878624 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features402Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records25

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0622.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

402 matching features · page 35 of 41

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P42137 3-Hydroxycotinine glucuronide 368.1223 16.567e-11
P42503 No candidate annotation 121.9563 11.147e-12
P42844 heptadecasphing-4-enine-1-phosphate 365.2297 13.539e-11
P42906 No candidate annotation 965.0180 17.66e-11
P43246 Adouetine Y 568.3113 12.429e-11
P43458 No candidate annotation 818.8998 17.221e-13
P43578 No candidate annotation 488.7049 17.594e-11
P43806 Gliovictin 354.1077 19.228e-11
P44090 Arenamide B 643.4002 17.071e-12
P44111 No candidate annotation 198.1308 12.672e-12