SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G050900

Alias COL16

Description Not annotated

Gene interval Chr16:4874634–4878624 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features402Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records25

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0622.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

402 matching features · page 14 of 41

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P14113 Upunaphenol N 934.2619 17.833e-11
P14156 Validamycin G 513.2050 11.915e-11
P14158 Physalien 650.1559 15.513e-12
P14245 2'-Deoxyinosine 5'-phosphate 332.0524 11.433e-11
P14376 Pentenylbenzene 146.1080 11.962e-13
P14703 Dillapional 236.0658 12.352e-13
P14914 No candidate annotation 539.6069 18.158e-12
P15145 Geodiamolide M 609.2125 11.692e-11
P15231 2-Propylphenol 136.0871 14.613e-11
P15835 AFN911 511.2738 11.094e-11