SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G003200

Description hypothetical protein

Gene interval Chr16:172940–178668 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features512Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

512 matching features · page 15 of 52

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P13413 (4-Ethylnaphthalen-1-yl)[1-(5-fluoropentyl)-1H-indol-3-yl]methanone 387.2022 11.964e-13
P13473 Cussoracoside C 642.3166 14.702e-11
P13485 Pharacine 440.1444 14.481e-12
P13516 17-AAG 585.3021 14.194e-11
P13790 No candidate annotation 317.1926 13.407e-11
P13994 2-Methyl-1-hydroxypropyl-ThPP 496.0955 11.018e-11
P14041 No candidate annotation 830.2084 13.386e-12
P14056 2-Oxo-8-methylthiooctanoic acid 204.0819 11.663e-11
P14158 Physalien 650.1559 16.622e-12
P14160 Mycotoxin T 2 341.1465 13.752e-12