SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.15G109500

Description hypothetical protein

Gene interval Chr15:8591856–8593774 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT4G22030:AT4G22030:F-box protein with a domain protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features72Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

72 matching features · page 4 of 8

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P32388 No candidate annotation 856.3574 16.749e-15
P32748 R-30-hydroxygambogic acid 644.3018 12.511e-12
P32764 No candidate annotation 924.3397 14.9e-12
P32770 BMY 28321 764.2841 14.829e-11
P33105 Glunicate 704.1962 15.321e-12
P35790 No candidate annotation 566.3075 16.949e-11
P35928 Aloesone 7-O-glucoside 394.1231 16.239e-11
P36124 Lusitanicoside 442.1820 12.158e-11
P36255 (E)-4-Oxo-2-nonenoic acid 170.0953 12.767e-11
P36845 Lespecyrtin H2 744.2797 13.927e-12