SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.13G149800

Description hypothetical protein

Gene interval Chr13:26329040–26335075 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT2G36580:AT2G36580:Pyruvate kinase family protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features32Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

32 matching features · page 3 of 4

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P34939 Tetrahydro-2,5-furan-diacetic acid 188.0686 13.947e-12
P35928 Aloesone 7-O-glucoside 394.1231 14.399e-12
P36897 No candidate annotation 167.0987 15.497e-13
P37917 No candidate annotation 166.1305 19.582e-11
P38074 1-(2-methoxy-tetracosanyl)-sn-glycero-3-phosphoserine 625.4301 15.601e-11
P42277 2beta-Hydroxytestosterone 304.2005 17.208e-12
P45645 (3E,5E)-Trideca-3,5-dienoylcarnitine 353.2533 18.851e-11
P45770 Sileneoside H 700.3687 12.388e-12
P46130 AMD 070 349.2298 14.152e-11
P49873 Stemaphylline 279.2251 16.749e-12