SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.13G134400

Description hypothetical protein

Gene interval Chr13:24677399–24693129 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features2619Overlap
Maximum supporting SNP records4
Features with ≥2 supporting SNP records2455

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4769.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

2619 matching features · page 248 of 262

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P05288 (6R,7R)-6-Methoxy-3,7-dimethyl-8-oxo-5-thia-1-azabicyclo[4.2.0]oct-2-ene-2-carboxylic acid 243.0573 13.284e-11
P05511 6-Aminopenicillanate 216.0563 12.737e-11
P05872 Formebolone 344.2031 11.181e-11
P06371 6-Carboxymethyl-3,5-dimethyl-4-hydroxypyridin-2-ol 197.0682 11.246e-11
P06434 Eupaglehnin F 400.1272 13.701e-13
P06448 N-[2-(4-Prenyloxyphenyl)ethyl]tiglamide 287.1906 13.395e-12
P06545 modafinil acid 274.0659 11.757e-11
P06804 Linderazulene 210.1049 14.054e-12
P06896 (E)-3-Hydroxy-2-(4-oxazolylmethylene)-butanal 167.0574 14.53e-11
P07347 Coumanolignan 318.1268 12.417e-13