SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.13G134400

Description hypothetical protein

Gene interval Chr13:24677399–24693129 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features2619Overlap
Maximum supporting SNP records4
Features with ≥2 supporting SNP records2455

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4769.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

2619 matching features · page 22 of 262

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P08490 Torokonine 449.2231 33.331e-14
P08500 Carpachromene dimethyl ether 364.1312 32.886e-13
P08524 No candidate annotation 813.2247 32.992e-14
P08546 No candidate annotation 169.0440 32.839e-11
P08564 Velamolone acetate 358.2198 36.714e-13
P08612 Scrophuloside A7 752.2562 33.449e-14
P08614 N-Butyryl-L-homoserine lactone 171.0875 33.74e-13
P08637 Melrosin A 476.1729 34.688e-12
P08711 Xylogranatinin 192.0516 36.623e-14
P08724 Didemnimide A 278.0804 31.218e-13