SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.12G186300

Description hypothetical protein

Gene interval Chr12:34717587–34719271 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features128Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records63

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.4922.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

128 matching features · page 3 of 13

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P21485 Newbouldioside C 976.3055 26.352e-14
P22290 No candidate annotation 508.3503 24.674e-12
P22360 Polyarginine 486.3149 27.176e-13
P22796 Argylioside 704.2463 21.25e-12
P23057 Fantofarone 550.2490 22.282e-12
P23164 No candidate annotation 270.2332 29.716e-14
P23194 (5Z,7E)-(1S,2S,3R)-2-chloro-9,10-seco-5,7,10(19)-cholestatriene-1,3,25-triol 450.2905 22.935e-12
P23288 Methylthymol blue 756.2618 29.771e-13
P23442 S-(N-Hydroxy-N-methylcarbamoyl)glutathione 380.0975 21.18e-11
P23839 Pelargonidin 3-O-[2-O-beta-D-glucopyranosyl-6-O-(E)-p-coumaroyl-beta-D-glucopyranoside]-5-O-(beta-D-glucopyranoside) 902.2475 21.143e-11