SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.12G098000

Description hypothetical protein

Gene interval Chr12:8432078–8439545 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features75Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records1

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0133.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

75 matching features · page 1 of 8

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P52918 5,6-Cyclopenteno-1,2-benzanthracene 268.1274 23.695e-11
P01379 Equol 4'-sulfate 322.0506 11.32e-11
P03581 Elvitegravir 447.1248 18.729e-11
P04966 Dihydroxytryptamine 192.0882 18.729e-12
P05506 N-(3-oxo-butanoyl)-homoserine lactone 185.0673 12.041e-12
P07296 No candidate annotation 292.6173 14.149e-13
P10275 Nepenthone A 278.0412 15.871e-12
P10333 No candidate annotation 843.2660 13.423e-11
P10528 Etoperidone 377.1934 13.129e-11
P10897 8-Acetoxypinoresinol 4-glucoside 578.2000 12.627e-11