SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.12G059300

Description hypothetical protein

Gene interval Chr12:4289989–4292215 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features91Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records39

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.4286.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

91 matching features · page 9 of 10

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P40307 Dolaconine 419.2601 18.391e-11
P41497 No candidate annotation 587.7747 13.17e-11
P42052 Mixirin A 1042.5448 12.99e-11
P42132 No candidate annotation 981.0120 13.737e-11
P44467 Atorvastatin lactone 540.2405 14.84e-11
P46984 Oxyphenonium 347.2433 13.293e-12
P47996 PC(20:3(8Z,11Z,14Z)/22:2(13Z,16Z)) 863.6565 11.655e-11
P50486 5-oxo-7-(S-glutathionyl)-8Z,11Z,14Z-eicosatrienoic acid 597.2751 13.262e-11
P52892 Sodwanone B 484.3178 19.033e-11
P52922 Malachite green 328.1969 14.442e-11