SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.12G007800

Description hypothetical protein

Gene interval Chr12:572469–583974 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features99Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

99 matching features · page 6 of 10

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P29398 (+)-Didehydroarctigenin 370.1413 13.697e-13
P30950 14-Hydroxycathovaline 442.2134 11.328e-11
P32654 Bradykinin hydroxyproline 1075.5649 13.459e-12
P33368 (3beta, 5beta)-pregn-16(17)-en-3-ol-20-one 3-O-alpha-l-arabinopyranosyl-(1-4)-beta-d-glucopyranosyl-(1-2)-beta-d-glucopyranoside 772.3798 13.066e-12
P34206 No candidate annotation 958.3426 11.503e-12
P34892 Aristolin 629.2974 14.286e-12
P34921 Xyloccensin O 700.2387 12.889e-12
P35724 (2,7)-Decadienoylcarnitine 311.2147 16.009e-12
P35945 No candidate annotation 475.1093 15.019e-14
P36081 No candidate annotation 173.1252 19.114e-11