SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.10G257500

Description hypothetical protein

Gene interval Chr10:48386988–48389180 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features99Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

99 matching features · page 4 of 10

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P14739 Lacto-N-triose I 545.1963 11.924e-13
P15055 alpha-(Dimethylaminomethyl)-2-(3-ethyl-5-methyl-4-isoxazolyl)-1H-indole-3-methanol 313.1763 17.368e-11
P15131 B-Raf inhibitor 552.2457 13.505e-12
P15142 No candidate annotation 521.2481 11.06e-12
P15410 Epicoccin F 456.0445 15.162e-11
P15955 Sildenafil 474.2054 13.933e-11
P16775 PA(10:0/13:0) 522.3343 19.066e-12
P18019 AH 135Y 291.1104 18.324e-13
P18481 Eugenetin 220.0742 11.2e-11
P18545 Desalanylbenanomicinone 478.0926 11.329e-11