SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.10G239000

Description hypothetical protein

Gene interval Chr10:46755702–46757579 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features127Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records1

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0079.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

127 matching features · page 5 of 13

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P18979 Justalakonin 528.1312 17.186e-11
P19432 Newbouldiaquinone A 410.0842 16.468e-12
P20815 Tryptophyl-Glutamine 332.1517 16.004e-11
P20865 Ethoxychelerythrine 391.1430 12.775e-11
P21471 Illifunone C 252.1331 13.891e-13
P21978 2-tridecene-4,7-diynal 188.1190 16.249e-11
P22069 Suplatast 327.1539 13.05e-11
P22124 No candidate annotation 392.6469 14.571e-11
P22144 4''-O-Acetylmananthoside B 758.2033 12.305e-11
P22483 No candidate annotation 595.4576 17.95e-11