SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G068800

Description hypothetical protein

Gene interval Chr09:6979166–6993110 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT5G35560:AT5G35560:DENN (AEX-3) domain-containing protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features354Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

354 matching features · page 22 of 36

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P28922 1-hexadecanoyl-2-(5-oxo-valeroyl)-sn-glycero-3-phospho-(1'-myo-inositol) 670.3308 14.048e-12
P28936 No candidate annotation 505.2470 13.367e-12
P29027 Bazzanin J 492.0855 14.112e-11
P29279 Cyromazine 166.0980 11.115e-12
P29285 3-[4-[1-(4-Hydroxy-3-methoxyphenyl)-1,3-dihydroxyisopropoxy]-2-hydroxyphenyl]propyl alpha-L-rhamnopyranoside 510.2086 16.773e-17
P29543 Aristoloterpenate II 527.1907 12.959e-13
P29847 Met-enkephalin-Arg-Phe 876.3955 12.338e-13
P30042 No candidate annotation 939.4715 11.424e-11
P30313 Sufotidine 421.2175 12.159e-11
P30381 D,L-Buthionine 191.0988 12.327e-11