SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G068800

Description hypothetical protein

Gene interval Chr09:6979166–6993110 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT5G35560:AT5G35560:DENN (AEX-3) domain-containing protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features354Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

354 matching features · page 17 of 36

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P23057 Fantofarone 550.2490 13.726e-11
P23225 Foresaconitine 627.3491 11.433e-12
P23295 3beta-(4-Iodophenyl)tropan-2beta-carboxylic acid isopropyl ester 413.0800 18.549e-14
P23365 Desloratadine 310.1238 19.247e-15
P23412 N-Carboxyacetyl-D-phenylalanine 251.0785 14.722e-14
P23629 Cycloshizukaol A 548.2409 17.706e-11
P23832 Zanamivir 332.1323 12.883e-11
P23878 6-Deoxy-alpha-L-galactopyranosyl-(1->2)-beta-D-galactopyranosyl-(1->2)-D-xylose 458.1656 13.505e-13
P23904 Red chlorophyll catabolite 626.2738 13.356e-13
P24218 Lycofawcine 323.2051 15.004e-11