SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G059600

Description hypothetical protein

Gene interval Chr09:5504630–5507434 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT4G30010:AT4G30010:ATP-dependent RNA helicase

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features242Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

242 matching features · page 10 of 25

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P20058 7''-O-Phosphohygromycin 607.2054 14.556e-11
P20132 Thymidine 3',5'-cyclic monophosphate 304.0457 15.943e-11
P20577 Fendiline 315.1991 17.948e-11
P20602 Isorhamnetin 3-gentiotrioside-7-glucoside 964.2883 12.555e-11
P20730 1-dodecanoyl-glycero-3-phospho-(1'-myo-inositol) 516.2330 15.911e-12
P20821 No candidate annotation 665.2715 11.513e-12
P21337 3-(9-Adeninyl)propionic acid. 207.0794 11.022e-11
P21547 No candidate annotation 725.1200 11.8e-12
P21656 No candidate annotation 419.6725 16.776e-11
P21704 Dichlormid 207.0187 17.188e-11