SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G058900

Description hypothetical protein

Gene interval Chr09:5397968–5404650 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1562Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records111

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0711.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1562 matching features · page 98 of 157

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P31794 Cloricromen 395.1513 13.129e-14
P31816 Eremofortin E 335.1381 11.095e-11
P31818 21-Deoxycortisol 346.2123 16.188e-11
P31826 TR-Saponin A 1008.5123 11.13e-11
P31836 Ethambutol 204.1857 19.638e-11
P31946 PIP(20:4(6E,8Z,11Z,13E)-2OH(5S,15S)/16:0) 970.4828 11.187e-11
P31956 Sorbistin C 342.1651 14.083e-13
P31987 No candidate annotation 1185.5382 15.857e-11
P31991 Irroratin A 378.2030 11.408e-13
P32024 Lissoclinotoxin E 570.1710 11.164e-11