SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G058900

Description hypothetical protein

Gene interval Chr09:5397968–5404650 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1562Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records111

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0711.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1562 matching features · page 60 of 157

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P18987 Acetophenazine 411.1992 19.501e-12
P19004 5-Hydroxyketamine 253.0879 13.624e-12
P19075 Cyproteron 374.1642 13.304e-11
P19113 Lyngbyabellin E 863.2426 11.368e-11
P19115 Israpafant 488.1842 18.29e-11
P19149 No candidate annotation 727.2021 16.956e-19
P19172 5-Hydroxydec-8-enedioylcarnitine 359.2012 14.955e-11
P19232 No candidate annotation 664.0714 19.247e-11
P19235 (-)-Oriciacridone A 636.2152 16.215e-12
P19348 5,5-Dimethyl-1-ethyl-1,3-cyclopentadiene 122.1083 16.313e-11