SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G058900

Description hypothetical protein

Gene interval Chr09:5397968–5404650 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1562Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records111

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0711.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1562 matching features · page 119 of 157

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P40317 10,11-Dihydro-chalcomycin 702.3920 11.536e-12
P40331 3-Hydroxy-p-mentha-1,8-dien-7-al 166.0985 15.791e-11
P40346 No candidate annotation 570.1408 11.665e-14
P40362 BL V 424.0812 11.054e-15
P40405 No candidate annotation 659.3981 11.177e-12
P40439 LysoPC(18:3(6Z,9Z,12Z)/0:0) 517.3124 14.579e-12
P40497 Cannabisin E 642.2624 15.781e-12
P40736 2,4-Diamino-6-dimethylamino-1,3,5-triazine 154.0977 16.221e-12
P40835 Gnidicin-20-palmitate 866.4613 15.98e-12
P40935 No candidate annotation 259.2097 16.95e-15