SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G056300

Description hypothetical protein

Gene interval Chr09:5059486–5068979 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features175Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records1

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0057.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

175 matching features · page 7 of 18

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P17202 2,3-Dihydro-1H-pyrrolizine-5-carboxaldehyde 135.0669 17.262e-13
P17468 Actinamine 206.1284 19.969e-12
P17776 2'-Dehydrokanamycin A 482.2226 13.846e-11
P18249 No candidate annotation 842.2163 15.245e-11
P18799 No candidate annotation 731.2215 18.543e-11
P18987 Acetophenazine 411.1992 12.842e-11
P19149 No candidate annotation 727.2021 12.562e-12
P19741 Monoglyceride citrate 266.0633 14.93e-11
P19753 Petasinoside 531.2422 12.714e-13
P19987 Juncin K 706.3311 13.494e-11