SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G054100

Description hypothetical protein

Gene interval Chr09:4780506–4788669 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features396Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records1

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0025.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

396 matching features · page 18 of 40

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P22654 Excavatolide D 524.2197 11.331e-11
P22796 Argylioside 704.2463 11.467e-11
P23102 N-(3-hydroxy-heptanoyl)-homoserine lactone 229.1303 14.581e-11
P23158 Methyl n-formylanthranilate 179.0589 18.91e-12
P23295 3beta-(4-Iodophenyl)tropan-2beta-carboxylic acid isopropyl ester 413.0800 11.338e-12
P23325 2-Ethoxynaphthalene 172.0872 11.353e-11
P23832 Zanamivir 332.1323 15.487e-12
P23848 No candidate annotation 475.0555 11.866e-11
P23878 6-Deoxy-alpha-L-galactopyranosyl-(1->2)-beta-D-galactopyranosyl-(1->2)-D-xylose 458.1656 19.037e-11
P23907 No candidate annotation 968.2928 14.916e-11