SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G053800

Description hypothetical protein

Gene interval Chr09:4737413–4755632 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features949Overlap
Maximum supporting SNP records6
Features with ≥2 supporting SNP records769

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4278.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

949 matching features · page 93 of 95

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P44773 Benthaminin 1 326.1885 11.439e-11
P44887 1-(2,4,12-trimethyl-2E,5Z,7Z,9Z,11Z-hexadecapentaenoyl)-sn-glycero-3-O-(N,N,N-trimethyl)-homoserine 505.3423 11.196e-11
P44929 Pemigatinib 487.2058 17.086e-11
P45267 13alpha-(Isovaleroyloxy)-lupanine 348.2423 15.642e-11
P45758 15-Bromoparguer-7-ene-16-ol 366.1548 13.751e-11
P46123 ent-19-Acetoxy-14,15,16-trihydroxymanoyl oxide 398.2615 13.661e-12
P46395 dehydro-beta-Ionone 190.1332 12.732e-11
P46622 No candidate annotation 816.3538 11.831e-11
P47235 No candidate annotation 533.7844 17.137e-11
P47544 Ancorinoside C 861.4698 15.638e-11