SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G053800

Description hypothetical protein

Gene interval Chr09:4737413–4755632 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features949Overlap
Maximum supporting SNP records6
Features with ≥2 supporting SNP records769

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4278.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

949 matching features · page 9 of 95

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P09110 2-O-Caffeoylhydroxycitric acid 370.0529 31.962e-11
P09328 Methylglyoxal-bis-guanylhydrazone 170.0923 31.532e-11
P09334 1-(Pentafluorophenyl)propane 210.0481 35.817e-15
P09385 Kanamycin A 3'-phosphate 564.2044 34.467e-11
P09432 Metronidazole benzoate 275.0895 35.884e-11
P09497 2,5-Dimethylfuran 96.0575 34.837e-13
P09522 1-Sinapoyl-2,2'-diferuloylgentiobiose 900.2729 32.238e-12
P09553 Zafirlukast metabolite M5 591.2125 36.405e-11
P09624 No candidate annotation 475.1174 33.286e-12
P09645 Campyloside A 451.1460 33.423e-14