SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G053800

Description hypothetical protein

Gene interval Chr09:4737413–4755632 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features949Overlap
Maximum supporting SNP records6
Features with ≥2 supporting SNP records769

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4278.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

949 matching features · page 87 of 95

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P25345 Fura-2 641.1548 13.353e-11
P25386 P-Cttlvc-T 1045.4401 12.578e-13
P25844 N-Methyltetrahydrothalifendine-10-O-glucoside 501.2004 14.276e-11
P26320 Mingjinianuronide B 562.1334 11.134e-12
P26418 Antibiotic 273a1alpha 1112.3282 15.145e-11
P27381 Gliadins 631.2917 16.642e-13
P27623 2,5-Diisopropyl-3-methylphenol 192.1485 19.109e-11
P28444 7,3'-Dimethylorobol 314.0783 15.254e-11
P28499 THYMOLPHTHALEIN 430.2145 18.47e-11
P28501 No candidate annotation 433.2605 11.305e-11