SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G053800

Description hypothetical protein

Gene interval Chr09:4737413–4755632 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features949Overlap
Maximum supporting SNP records6
Features with ≥2 supporting SNP records769

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4278.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

949 matching features · page 86 of 95

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P22348 Phosphoagmatine 210.0880 14.72e-12
P22455 Nocloprost 400.2416 17.314e-11
P22796 Argylioside 704.2463 12.797e-12
P23225 Foresaconitine 627.3491 18.524e-11
P23412 N-Carboxyacetyl-D-phenylalanine 251.0785 11.984e-11
P23471 6-O-Glc-paromamine 485.2286 14.578e-11
P23848 No candidate annotation 475.0555 13.898e-12
P23849 Thiacloprid 252.0256 18.756e-11
P24278 Aknadicine 345.1608 18.124e-11
P25135 No candidate annotation 625.1735 15.724e-12