SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G053800

Description hypothetical protein

Gene interval Chr09:4737413–4755632 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features949Overlap
Maximum supporting SNP records6
Features with ≥2 supporting SNP records769

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4278.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

949 matching features · page 85 of 95

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P20003 14,15-Dihydroxygelsenicine 358.1544 15.013e-14
P20356 Cochinchinenin 514.2035 17.69e-11
P20846 Draflazine 603.1909 13.791e-12
P20905 No candidate annotation 787.3606 11.444e-11
P20973 SB 243213 428.1449 12.911e-11
P21337 3-(9-Adeninyl)propionic acid. 207.0794 11.391e-13
P21598 Parathiosteroid B 445.2646 12.964e-11
P21903 Triptregeline H 611.2282 13.383e-11
P21921 Endoxifen O-glucuronide 551.2513 15.489e-12
P22273 (-)-Epigallocatechin 3-gallate 7-glucoside 4"-glucuronide 796.1602 11.715e-11