SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G053800

Description hypothetical protein

Gene interval Chr09:4737413–4755632 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features949Overlap
Maximum supporting SNP records6
Features with ≥2 supporting SNP records769

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4278.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

949 matching features · page 73 of 95

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P37067 No candidate annotation 1418.2396 23.269e-12
P37077 6-Hydroxydecanoyl-CoA 937.2289 21.221e-11
P37151 Aldohexose 6-phosphate 260.0300 21.26e-12
P37462 Daechuine S10 564.2970 22.694e-11
P37611 No candidate annotation 832.3435 21.396e-11
P37757 trans,cis,cis,cis-2,10,13,16-Docosatetraenoyl-CoA 1081.3878 29.204e-12
P37758 Paniculidine B 233.1417 28.258e-11
P37898 Dechlorobarbamide 426.0942 23.942e-11
P38337 No candidate annotation 1013.0264 24.373e-11
P38440 No candidate annotation 542.2658 27.953e-12