SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G053800

Description hypothetical protein

Gene interval Chr09:4737413–4755632 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features949Overlap
Maximum supporting SNP records6
Features with ≥2 supporting SNP records769

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4278.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

949 matching features · page 67 of 95

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P23179 2-Aminoadenine 150.0649 26.129e-11
P23442 S-(N-Hydroxy-N-methylcarbamoyl)glutathione 380.0975 23.559e-11
P23530 S-Isopropyl 3-methylbut-2-enethioate 158.0767 25.236e-11
P23669 3-Oxopentanoylcarnitine 259.1408 22.692e-11
P23684 No candidate annotation 823.2915 26.696e-11
P23722 Echinacoside 786.2716 23.087e-11
P23907 No candidate annotation 968.2928 23.938e-12
P23936 Cistanoside C 638.2217 28.187e-11
P24061 Trifoliolasine F 683.2767 25.506e-11
P24441 FR 235222 556.3195 29.547e-11