SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G053800

Description hypothetical protein

Gene interval Chr09:4737413–4755632 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features949Overlap
Maximum supporting SNP records6
Features with ≥2 supporting SNP records769

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4278.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

949 matching features · page 47 of 95

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P41596 No candidate annotation 986.0047 32.561e-12
P41611 No candidate annotation 985.5068 36.475e-12
P41665 (-)-CP 263,114 552.2353 37.087e-12
P41709 Hyzetimibe 421.1442 31.301e-12
P41811 No candidate annotation 1136.5626 32.774e-11
P41917 TMC 2A 570.2358 33.059e-13
P41950 5,6-Epoxyoctadeca-7,9-diynoic acid 290.1854 31.132e-12
P42108 alpha-Curcumene 202.1704 37.57e-11
P42330 Serratezomine A 279.1809 31.068e-11
P42603 No candidate annotation 463.1322 31.24e-12