SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G053800

Description hypothetical protein

Gene interval Chr09:4737413–4755632 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features949Overlap
Maximum supporting SNP records6
Features with ≥2 supporting SNP records769

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4278.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

949 matching features · page 41 of 95

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P34553 No candidate annotation 820.2762 31.513e-12
P34642 Adenolin D 422.2247 36.003e-11
P34777 No candidate annotation 311.2896 31.661e-11
P34826 Didmolamide B 556.1551 33.193e-11
P34859 Fudosteine 179.0619 38.599e-18
P35050 2-Ethoxynaphthalene 172.0876 31.777e-11
P35069 1-hexadecanoyl-2-succinyl-sn-glycero-phosphocholine 595.3591 32.752e-12
P35092 No candidate annotation 314.6285 31.624e-13
P35106 Nona-4,6-dienoylcarnitine 297.1949 31.689e-12
P35207 LysoPC(6:0/0:0) 355.1768 34.017e-14