SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G053800

Description hypothetical protein

Gene interval Chr09:4737413–4755632 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features949Overlap
Maximum supporting SNP records6
Features with ≥2 supporting SNP records769

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4278.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

949 matching features · page 38 of 95

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P31977 p-O-glucuronide rosiglitazone 549.1466 31.465e-12
P31987 No candidate annotation 1185.5382 31.946e-11
P31991 Irroratin A 378.2030 31.394e-13
P32073 Tibouchinin 800.2208 33.265e-12
P32148 1-hexadecanoyl-2-(4-hydroxy-7-oxo-5E-heptenoyl)-sn-glycero-3-phospho-(1'-sn-glycerol) 624.3290 37.294e-14
P32158 Xanthoxoline 271.0806 32.221e-12
P32236 14-hydroxy-11Z,17Z-eicosadienoic acid 324.2632 32.401e-13
P32359 Codonopyrrolidium B 267.1489 31.53e-11
P32445 Fleroxacin 369.1302 32.459e-11
P32460 Actinoplanone E 624.1497 35.972e-11