SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G053800

Description hypothetical protein

Gene interval Chr09:4737413–4755632 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features949Overlap
Maximum supporting SNP records6
Features with ≥2 supporting SNP records769

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4278.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

949 matching features · page 17 of 95

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P15275 Tulipalin A 98.0374 31.95e-12
P15332 [Protein]-S8-aminomethyldihydrolipoyllysine 236.1009 33.32e-11
P15465 Ripasudil 323.1081 37.977e-14
P15486 Apigenin 7-(2''-acetyl-6''-methylglucuronide) 502.1086 36.278e-13
P15527 (1S,4R)-passicapsin 417.1645 38.76e-15
P15566 1-(2,4,6-Trimethylphenoxy)propan-2-amine 193.1459 32.882e-14
P15582 No candidate annotation 853.3764 36.368e-12
P15603 Coenzyme F420-1 644.1384 38.098e-12
P15635 4-Aminophenylacetic acid 151.0649 31.226e-12
P15731 HDMBOA-Glc 387.1176 34.29e-13