SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G052700

Description hypothetical protein

Gene interval Chr09:4617652–4626364 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G31120:KUP10:K+ uptake permease 10

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1463Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records3

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0021.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1463 matching features · page 77 of 147

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P29582 Rhopaladin D 354.1147 14.934e-12
P29590 Hedyotisol A 810.3054 11.552e-11
P29594 Butanoic acid, 3-((2-naphthalenylsulfonyl)amino)-4-oxo-4-((2-phenylethyl)amino)-, (S)- 426.1242 12.443e-12
P29654 3,5,5-Trimethyl-1,2-cyclohexanedione 154.0984 12.046e-12
P29662 2,3-Dihydro-9-hydroxy-2-[1-(6-feruloyl)-beta-D-glucosyloxy-1-methylethyl]-7H-furo[3,2-g][1]benzopyran-7-one 600.1811 16.721e-11
P29734 Stemphyloxin I 382.2333 11.968e-11
P29744 Miraziridine A 668.3944 16.415e-11
P29772 Ecadotril 385.1363 17.693e-11
P29775 Galangin 5-methyl ether 284.0665 14.188e-11
P29799 Chaetoxanthone C 390.0909 14.167e-11