SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.07G069400

Description hypothetical protein

Gene interval Chr07:6270176–6283087 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT2G46020:BRM:transcription regulatory protein SNF2

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features303Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records52

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.1716.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

303 matching features · page 3 of 31

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P23585 No candidate annotation 966.3061 21.093e-11
P24826 Actinoplanone G 618.1737 21.965e-12
P26089 Kni 102 595.2949 27.225e-14
P26160 N-Phenylpropionamide 149.0838 22.522e-13
P26425 Cinnacassiol 842.3264 21.933e-11
P28040 Tegoprazan 387.1397 22.714e-11
P28044 5-Methoxy-3,4-methylenedioxyamphetamine 209.1050 24.082e-12
P28058 Huperzine T 277.1650 28.099e-13
P28614 Cantleyoside 746.2677 22.119e-13
P29285 3-[4-[1-(4-Hydroxy-3-methoxyphenyl)-1,3-dihydroxyisopropoxy]-2-hydroxyphenyl]propyl alpha-L-rhamnopyranoside 510.2086 21.581e-13