SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.07G015700

Description hypothetical protein

Gene interval Chr07:1244977–1251198 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G79750:NADP-ME4:NADP-malic enzyme 4

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1774Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records5

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0028.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1774 matching features · page 81 of 178

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P23229 Isariotin E 377.2268 17.185e-12
P23243 14-Acetoxy-15-hydroxygelsenicine 400.1637 18.284e-11
P23263 Methyl n-formylanthranilate 179.0598 18.715e-11
P23266 beta-D-Glucopyranosylurea 222.0841 18.48e-11
P23316 Viburtinal 160.0509 16.564e-11
P23325 2-Ethoxynaphthalene 172.0872 16.012e-11
P23345 Paecilodepsipeptide C 773.3784 19.096e-13
P23359 Trichodenone A 124.0516 14.615e-14
P23382 1-(1-Naphthylmethyl)-1,2,3,4-tetrahydroisoquinoline-6,7-diol 305.1398 18.253e-12
P23412 N-Carboxyacetyl-D-phenylalanine 251.0785 14.171e-16