SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.06G305200

Description hypothetical protein

Gene interval Chr06:49420013–49426780 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT3G21690:AT3G21690:MATE efflux family protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features385Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records12

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0312.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

385 matching features · page 17 of 39

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P18584 ES-242-3 620.2261 17.318e-11
P18799 No candidate annotation 731.2215 13.273e-11
P18819 Swietenidin B 205.0753 15.998e-11
P18867 5-(3',4',5'-Trihydroxyphenyl)-gamma-valerolactone 224.0655 15.45e-11
P18979 Justalakonin 528.1312 11.208e-12
P19069 No candidate annotation 353.5640 19.829e-11
P19115 Israpafant 488.1842 13.178e-11
P19144 4-Fluoro-1-[2-[(4-methyl-1-methylsulfonylpiperidin-4-yl)amino]acetyl]pyrrolidine-2-carbonitrile 346.1459 12.01e-11
P19274 LysoPE(20:5(5Z,8Z,11Z,14Z,17Z)/0:0) 499.2715 12.359e-12
P19315 Topisolon 376.2052 15.861e-14