SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.06G112700

Description hypothetical protein

Gene interval Chr06:9156973–9158659 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1840Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records3

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0016.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1840 matching features · page 133 of 184

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P38832 1-eicosyl-glycero-3-phosphate 452.3250 19.846e-11
P38887 8alpha-Ethoxyprecriwelline 359.1716 14.285e-11
P38890 Sarmentamide A 215.0951 11.863e-11
P38925 Dihydroergosine 549.2992 16.333e-12
P38950 Plakortenone 326.2057 13.066e-12
P38954 LysoPC(0:0/20:4(5Z,8Z,11Z,14Z)) 543.3351 16.492e-13
P38971 LysoPI(18:2(9Z,12Z)/0:0) 596.2964 16.41e-13
P38983 Chrysopentamine 559.2948 18.638e-12
P38985 Mucronulatol-(4->5')-vestitol 572.1988 11.065e-11
P39006 Dermorphin 802.3633 16.845e-11