SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 42 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P07284 Spicatolide C 312.1233 11.344e-12
P07302 Melampyroside 450.1506 15.115e-11
P07305 5-(3'-Carboxy-3'-oxopropenyl)-4,6-dihydroxypicolinate 253.0211 11.4e-13
P07310 2-Hydroxyethyl gardenamide A 267.1084 14.59e-11
P07313 Benzoxazole 119.0370 12.003e-11
P07320 Vipadenant 321.1347 12.684e-11
P07329 Matteucinol 7-rhamnoside 460.1725 11.28e-16
P07347 Coumanolignan 318.1268 14.317e-12
P07352 Benzoxazole 119.0351 16.831e-16
P07366 O-Phospho-L-serine 185.0125 17.698e-13