SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 155 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P22470 Lithospermoside 329.1094 18.755e-15
P22496 N-(5-[(2R)-6-Hydroxy-2,5,7,8-tetramethyl-3,4-dihydrochromen-2-yl]-propanoyl)-glutamine 406.2098 12.759e-13
P22499 Rosmadial 344.1593 13.416e-15
P22504 Swietenidin B 205.0736 11.389e-11
P22518 (13Z,16Z,19Z)-Tricosa-13,16,19-trienoyl-CoA 1097.4030 15.721e-13
P22523 Taxifolin 3-galactosyl-(1->6)-glucoside 628.1763 12.069e-13
P22533 Streptovirudin A2 788.3608 12.799e-13
P22546 Upunaphenol N 934.2704 13.422e-12
P22565 Androstane-3,17-diol 17-sulfate 372.1984 15.743e-19
P22578 No candidate annotation 583.1306 11.941e-17