SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 102 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P14952 Syncarpamide 457.1906 12.89e-11
P14965 10-ethoxy-2methylene-10-oxodecanoic acid 242.1492 15.734e-11
P14969 2,4-Dinitrophenylhydrazone 270.0582 13.954e-11
P14970 Benzonaphthazepine 243.1062 12.613e-14
P14986 N-(2-hydroxyhexadecanoyl)-sphinganine 555.5217 15.181e-15
P14990 Enkephalin L 555.2689 11.705e-22
P14994 Limonenecarboxylic acid 180.1150 12.384e-13
P15003 Brasofensine 326.0962 11.035e-11
P15004 Myricetin 3-(3'''-6'''-diacetylglucosyl)-(1->4)-(2'',3''-diacetylrhamnoside) 794.1814 12.623e-15
P15034 Newbouldiaquinone A 410.0836 13.516e-12