Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.04G190900

Description hypothetical protein

Gene interval Chr04:46152356–46155245 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT5G63160:BT1:BTB and TAZ domain protein 1__AT3G48360:BT2:BTB and TAZ domain protein 2

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features54Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

54 matching features · page 6 of 6

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P52814 No candidate annotation 340.2742 12.804e-11
P53063 N-(15-methyl-hexadecanoyl) glycine 327.2732 11.228e-13
P53413 Tetradecyl nicotinate 319.2477 12.249e-11
P54338 1-(9Z-nonadecenoyl)-glycero-3-phosphate 450.2737 13.357e-11