SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.04G124800

Description hypothetical protein

Gene interval Chr04:16368438–16390781 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features25Overlap
Maximum supporting SNP records9
Features with ≥2 supporting SNP records9

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.6400.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

25 matching features · page 2 of 3

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P06259 No candidate annotation 150.0611 14.391e-11
P09081 No candidate annotation 623.2447 12.737e-11
P10088 Chiapenine ES-I 945.2967 13.975e-11
P11636 Benzomalvin C 395.1307 13.532e-11
P16631 1,2-Dihydro-1,6,6-trimethylnaphthalene 172.1235 19.355e-11
P17503 5-Hydroxy-7,8-dimethoxyflavanone 5-rhamnoside 446.1586 15.009e-11
P19561 Davidiol C 904.2575 17.591e-11
P20499 No candidate annotation 587.1674 14.255e-11
P21529 Hosloppin 392.0948 13.31e-11
P22680 1,4-Divinylbenzene 130.0773 18.402e-11