SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.04G116900

Description hypothetical protein

Gene interval Chr04:13696275–13700803 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features754Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

754 matching features · page 21 of 76

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P14714 (7R)-7-(5-Carboxy-5-oxopentanoyl)aminocephalosporinate 414.0696 16.024e-13
P14806 [3R-(3alpha,4beta,5alpha,5aalpha,6alpha,9beta,9aalpha,10R*)]-5-(Acetyloxy)-6-(benzoyloxy)octahydro-4,9-dihydroxy-2,2,5a,9-tetramethyl-2H-3,9a-methano-1-benzoxepin-10-yl ester 3-pyridinecarboxylic acid 553.2239 14.056e-11
P14817 Delphinidin 3-(6-malonylglucoside)-5-glucoside 712.1486 11.36e-12
P14825 9R-hydroxy-2E,4E-decadienoic acid 184.1086 11.516e-12
P14914 No candidate annotation 539.6069 16.976e-11
P14970 Benzonaphthazepine 243.1062 14.039e-11
P15055 alpha-(Dimethylaminomethyl)-2-(3-ethyl-5-methyl-4-isoxazolyl)-1H-indole-3-methanol 313.1763 19.925e-12
P15114 No candidate annotation 831.2649 15.984e-12
P15127 Quin-2 acetoxymethyl ester 829.2553 12.14e-11
P15132 No candidate annotation 405.5771 15.207e-11