SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.04G116900

Description hypothetical protein

Gene interval Chr04:13696275–13700803 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features754Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

754 matching features · page 20 of 76

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P13663 No candidate annotation 754.1691 18.685e-11
P13664 2-Hydroxy-6-oxonona-2,4-diene-1,9-dioate 214.0480 11.588e-12
P13732 Bacampicillin 465.1559 11.966e-11
P13915 Centhaquine 331.2032 12.572e-12
P13935 Malvidin 3-glucoside-5-(6-acetylglucoside) 698.1805 14.864e-12
P14251 N-4-[2(R)-Amino-3-mercaptopropyl]amino-2-naphthylbenzoyl-(L)-leucine, TFA 465.2092 13.776e-12
P14294 Rostratamine 485.2322 11.687e-12
P14315 Minwanensin 284.1580 19.768e-11
P14320 Canaliculatol 680.2091 11.057e-11
P14438 4-hydroxyoct-6-enoylglycine 215.1129 11.084e-12