SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.04G116900

Description hypothetical protein

Gene interval Chr04:13696275–13700803 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features754Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

754 matching features · page 12 of 76

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P08546 No candidate annotation 169.0440 14.82e-12
P08553 Phaseoloidin 330.0953 18.336e-11
P08581 14-Hydroxyisostephodeline 389.1817 16.308e-11
P08737 3-Isopentadienyl-3',4,5'-trihydroxystilbene 294.1273 18.676e-12
P08763 No candidate annotation 831.2168 12.354e-11
P08828 Thorectandramine 437.1702 15.663e-12
P08833 (-)-Acaterin 226.1567 11.305e-11
P08885 (5R,6S)-5,6-Epoxy-7-megastigmen-9-one 208.1431 17.407e-13
P08896 4-Deoxypyridoxine 153.0769 11.341e-12
P08908 Clofoctol 364.1350 16.51e-11