SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.04G104400

Description hypothetical protein

Gene interval Chr04:9885009–9889282 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features643Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

643 matching features · page 7 of 65

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P06565 N-[(5-{2-[(6R)-2-Amino-4-oxo-3,4,5,6,7,8-hexahydropyrido[2,3-D]pyrimidin-6-YL]ethyl}-2-thienyl)carbonyl]-L-glutamic acid 449.1443 11.668e-11
P06599 Vitexin 2''-p-hydroxybenzoate 552.1357 13.99e-12
P06792 Myo-inositol glutamate 323.0859 11.195e-12
P06814 (E)-Methyl-4-hydroxycinnamate 178.0638 12.061e-12
P06840 13-Hydroxypalmatine 367.1410 11.177e-11
P06881 No candidate annotation 697.2884 17.765e-12
P06953 Aglatenin 289.0814 18.911e-11
P06960 6-Methoxy-2-[(4-methylphenyl)methylsulfanyl]-1H-benzimidazole 284.0970 12.78e-11
P06981 No candidate annotation 135.0636 18.255e-13
P06995 No candidate annotation 391.0398 15.44e-11