SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.04G104400

Description hypothetical protein

Gene interval Chr04:9885009–9889282 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features643Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

643 matching features · page 23 of 65

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P17718 No candidate annotation 751.2336 17.626e-12
P17883 No candidate annotation 587.8008 17.99e-12
P17984 No candidate annotation 153.0847 14.239e-14
P18041 Neocalyxin A 474.1701 13.033e-12
P18076 (S)-4-(2,4-Difluoro-5-(pyrimidin-5-yl)phenyl)-4-methyl-5,6-dihydro-4H-1,3-thiazin-2-amine 320.0919 17.19e-12
P18416 No candidate annotation 340.6336 19.229e-12
P18513 Thapsigargin 650.3309 11.337e-12
P18591 No candidate annotation 704.3079 11.24e-11
P18621 (4Z,6Z)-Octa-4,6-dienoylcarnitine 283.1757 14.79e-11
P18846 Ulithiacyclamide E 832.2188 14.304e-11