SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.03G177600

Description hypothetical protein

Gene interval Chr03:39038546–39045751 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT2G37050:AT2G37050:Leucine-rich repeat protein kinase family protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features22Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

22 matching features · page 1 of 3

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P00355 Nitrazine 233.1224 16.206e-11
P03413 Gatifloxacin 375.1634 11.448e-12
P05407 Aprobarbital 210.0978 17.004e-11
P06059 Guvacoline 141.0776 19.256e-11
P06953 Aglatenin 289.0814 11.281e-14
P06986 No candidate annotation 409.0632 11.015e-11
P11198 alpha-Pyrrolidinovalerophenone 231.1637 19.133e-11
P12290 No candidate annotation 980.2127 15.554e-11
P16744 Pemafibrate 490.2109 11.088e-11
P18046 No candidate annotation 980.2135 19.871e-11