SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.03G068700

Description hypothetical protein

Gene interval Chr03:14244745–14265521 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT5G41970:AT5G41970:Metal-dependent protein hydrolase

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features90Overlap
Maximum supporting SNP records4
Features with ≥2 supporting SNP records1

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0333.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

90 matching features · page 7 of 9

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P33900 No candidate annotation 912.3378 13.341e-22
P34046 1-(2-methylpropanoyl)-3-acetyl-11-methoxymeliacarpinin 678.2852 12.641e-61
P34171 No candidate annotation 812.3455 17.447e-28
P34429 Dracoflavan A 794.3087 11.066e-12
P34481 Umbilicaxanthoside B 734.2785 12.628e-62
P34515 Bn-NCC-1 716.2688 13.218e-12
P34585 Boivinide F 752.3598 12.067e-16
P34620 No candidate annotation 812.3464 11.209e-16
P34710 7-O-Methyltetrahydroochnaflavone 556.1442 16.597e-35
P34888 Kansuinin H 746.2750 11.107e-35