SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.03G021600

Description hypothetical protein

Gene interval Chr03:2240686–2246512 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2__AT2G44890:CYP704A1:cytochrome P450, family 704, subfamily A, polypeptide 1

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features588Overlap
Maximum supporting SNP records4
Features with ≥2 supporting SNP records101

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.2177.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

588 matching features · page 48 of 59

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P40551 Valnemulin 564.3618 14.379e-11
P40626 CDP-DG(i-18:0/18:2(9Z,11Z)) 1005.5541 16.989e-11
P40857 5beta,6beta:22R,26-diepoxyergosta-4beta,19,27-trihydroxy-24-ene-1,26-dione 3beta-sulphate 584.2307 15.042e-11
P40996 PI(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/6 keto-PGF1alpha) 996.5205 14.976e-11
P41007 Loperamide oxide 492.2170 11.787e-11
P41062 Suspensolide D 520.2153 17.106e-11
P41349 3alpha-Isobutyryloxytropane 211.1612 15.206e-12
P41353 Deoxyharringtonine 515.2462 14.723e-11
P41403 Levetiracetam 170.1061 19.239e-12
P41491 No candidate annotation 677.8221 18.722e-12